STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tsac_1670KEGG: txy:Thexy_1447 hypothetical protein. (160 aa)    
Predicted Functional Partners:
Tsac_1589
PFAM: Protein of unknown function DUF1614; KEGG: txy:Thexy_1083 hypothetical protein.
 
     0.732
Tsac_0644
KEGG: txy:Thexy_0081 hypothetical protein.
  
     0.731
Tsac_2065
KEGG: txy:Thexy_1519 hypothetical protein.
  
     0.709
Tsac_1590
KEGG: txy:Thexy_1084 stage II sporulation protein P; TIGRFAM: Sporulation stage II, protein P; PFAM: Sporulation stage II, protein P.
 
     0.708
Tsac_0444
KEGG: txy:Thexy_2337 hypothetical protein.
  
     0.680
Tsac_2191
KEGG: txy:Thexy_1033 sporulation protein YunB; TIGRFAM: Sporulation protein YunB; PFAM: Sporulation protein YunB, C-terminal.
  
     0.663
Tsac_1915
KEGG: txy:Thexy_1198 hypothetical protein.
  
     0.648
Tsac_2006
KEGG: txy:Thexy_1464 hypothetical protein.
  
     0.629
Tsac_1241
KEGG: txy:Thexy_0520 PDZ/DHR/GLGF domain protein; PFAM: PDZ/DHR/GLGF; SMART: PDZ/DHR/GLGF.
  
     0.577
Tsac_0619
KEGG: txy:Thexy_0052 hypothetical protein.
  
     0.572
Your Current Organism:
Thermoanaerobacterium saccharolyticum
NCBI taxonomy Id: 1094508
Other names: T. saccharolyticum JW/SL-YS485, Thermoanaerobacterium saccharolyticum JW/SL-YS485, Thermoanaerobacterium saccharolyticum str. JW/SL-YS485, Thermoanaerobacterium saccharolyticum strain JW/SL-YS485, Thermoanaerobacterium sp. (strain JW/SL YS485)
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