STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tsac_2210KEGG: txy:Thexy_1014 asparagine synthase (glutamine-hydrolyzing); TIGRFAM: Asparagine synthase, glutamine-hydrolyzing; PFAM: Asparagine synthase; Glutamine amidotransferase, class-II. (614 aa)    
Predicted Functional Partners:
Tsac_2392
KEGG: mbu:Mbur_1580 asparagine synthase, glutamine-hydrolyzing; TIGRFAM: Asparagine synthase, glutamine-hydrolyzing; PFAM: Asparagine synthase; Glutamine amidotransferase, class-II.
  
  
 
0.921
argG
TIGRFAM: Argininosuccinate synthase; HAMAP: Argininosuccinate synthase; KEGG: txy:Thexy_0208 argininosuccinate synthase; PFAM: Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
   
 0.913
pyrB
TIGRFAM: Aspartate carbamoyltransferase, eukaryotic; HAMAP: Aspartate carbamoyltransferase; KEGG: txy:Thexy_1411 aspartate carbamoyltransferase; PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding; Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding region; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.
  
 
 0.913
purA
Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.
   
 
 0.912
Tsac_1857
PFAM: Aminotransferase, class I/II; KEGG: txy:Thexy_1256 aspartate transaminase.
   
 
 0.907
Tsac_2159
PFAM: Aminotransferase, class I/II; KEGG: txy:Thexy_0848 aspartate transaminase.
   
 
 0.907
Tsac_2171
PFAM: Asparaginase/glutaminase; KEGG: txy:Thexy_0846 asparaginase.
     
 0.907
Tsac_0815
PFAM: Fumarate lyase; Fumarase C, C-terminal; KEGG: txy:Thexy_0216 aspartate ammonia-lyase.
     
 0.900
Tsac_1150
L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate.
     
  0.900
Tsac_2340
Protein of unknown function DUF129; PFAM: F420-0:gamma-glutamyl ligase-related; KEGG: txy:Thexy_0922 hypothetical protein.
 
      0.892
Your Current Organism:
Thermoanaerobacterium saccharolyticum
NCBI taxonomy Id: 1094508
Other names: T. saccharolyticum JW/SL-YS485, Thermoanaerobacterium saccharolyticum JW/SL-YS485, Thermoanaerobacterium saccharolyticum str. JW/SL-YS485, Thermoanaerobacterium saccharolyticum strain JW/SL-YS485, Thermoanaerobacterium sp. (strain JW/SL YS485)
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