STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tsac_2320PFAM: Glycosidase, PH1107-related; KEGG: txy:Thexy_0932 glycosidase related protein. (297 aa)    
Predicted Functional Partners:
Tsac_0625
PFAM: Glycosyl transferase, group 1; KEGG: txy:Thexy_0059 glycosyl transferase group 1.
 
  
 0.792
Tsac_0626
KEGG: txy:Thexy_0060 hypothetical protein.
 
     0.781
Tsac_2321
PFAM: Glycosidase, PH1107-related; KEGG: txy:Thexy_0931 glycosidase related protein.
 
    
0.762
Tsac_2322
PFAM: Beta-galactosidase trimerisation; KEGG: tbo:Thebr_2228 beta-galactosidase trimerisation domain-containing protein; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
       0.740
Tsac_2323
ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: mas:Mahau_2312 CUT1 family carbohydrate ABC transporter membrane protein 2.
       0.593
Tsac_2324
ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: mas:Mahau_2313 CUT1 family carbohydrate ABC transporter membrane protein 1.
  
    0.564
Tsac_2325
PFAM: Bacterial extracellular solute-binding, family 1; KEGG: mas:Mahau_2314 CUT1 family carbohydrate ABC transporter substrate-binding protein.
 
     0.499
Tsac_2319
PFAM: Protein of unknown function DUF6, transmembrane; KEGG: txy:Thexy_0941 hypothetical protein.
       0.497
Tsac_2328
Glycosidase related protein; Converts 4-O-beta-D-mannopyranosyl-D-glucopyranose (Man-Glc) to mannose 1-phosphate (Man1P) and glucose; Belongs to the glycosyl hydrolase 130 family.
 
    
0.445
Tsac_2329
N-acylglucosamine 2-epimerase; Catalyzes the reversible epimerization of cellobiose to 4-O- beta-D-glucopyranosyl-D-mannose (Glc-Man).
 
   
 0.441
Your Current Organism:
Thermoanaerobacterium saccharolyticum
NCBI taxonomy Id: 1094508
Other names: T. saccharolyticum JW/SL-YS485, Thermoanaerobacterium saccharolyticum JW/SL-YS485, Thermoanaerobacterium saccharolyticum str. JW/SL-YS485, Thermoanaerobacterium saccharolyticum strain JW/SL-YS485, Thermoanaerobacterium sp. (strain JW/SL YS485)
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