STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tsac_2442KEGG: mas:Mahau_0551 hypothetical protein. (249 aa)    
Predicted Functional Partners:
Tsac_2441
Hypothetical protein.
       0.773
Tsac_2443
Hypothetical protein.
       0.773
Tsac_2444
Hypothetical protein.
       0.714
Tsac_2440
KEGG: chd:Calhy_0751 hypothetical protein.
  
    0.625
Tsac_2437
KEGG: ccv:CCV52592_0062 hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP01671; PFAM: YopX protein.
  
    0.593
Tsac_2439
KEGG: mas:Mahau_0086 hypothetical protein.
       0.563
Tsac_2433
KEGG: tep:TepRe1_1040 hypothetical protein.
       0.553
Tsac_2434
KEGG: tep:TepRe1_1038 hypothetical protein.
       0.553
Tsac_2435
Hypothetical protein.
       0.553
Tsac_2436
KEGG: tit:Thit_1403 hypothetical protein.
       0.553
Your Current Organism:
Thermoanaerobacterium saccharolyticum
NCBI taxonomy Id: 1094508
Other names: T. saccharolyticum JW/SL-YS485, Thermoanaerobacterium saccharolyticum JW/SL-YS485, Thermoanaerobacterium saccharolyticum str. JW/SL-YS485, Thermoanaerobacterium saccharolyticum strain JW/SL-YS485, Thermoanaerobacterium sp. (strain JW/SL YS485)
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.