STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tsac_2664PFAM: NLP/P60; KEGG: txy:Thexy_1872 NLP/P60 protein. (433 aa)    
Predicted Functional Partners:
Tsac_2666
Putative signal transduction protein with CBS domains; PFAM: Nucleotidyl transferase; Cystathionine beta-synthase, core; KEGG: txy:Thexy_1874 nucleotidyl transferase.
       0.673
Tsac_2667
TIGRFAM: Sialic acid O-acyltransferase, NeuD; KEGG: txy:Thexy_1875 sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family.
       0.666
Tsac_2665
PFAM: Acylneuraminate cytidylyltransferase; KEGG: txy:Thexy_1873 N-acylneuraminate cytidylyltransferase.
       0.658
Tsac_2668
KEGG: txy:Thexy_1876 N-acetylneuraminate synthase; TIGRFAM: N-acetylneuraminate synthase; PFAM: N-acetylneuraminic acid synthase, N-terminal; SAF domain.
       0.574
Tsac_2671
PFAM: NAD-dependent epimerase/dehydratase; KEGG: txy:Thexy_1881 dTDP-glucose 4,6-dehydratase.
     
 0.529
Tsac_2670
PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: txy:Thexy_1880 glutamine--scyllo-inositol transaminase.
  
    0.527
Tsac_2669
KEGG: tit:Thit_0480 UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing; TIGRFAM: UDP-N-acetylglucosamine 2-epimerase,UDP-hydrolysing; PFAM: UDP-N-acetylglucosamine 2-epimerase.
       0.519
Tsac_2672
PFAM: Protein of unknown function DUF115; KEGG: txy:Thexy_1882 hypothetical protein.
       0.455
Tsac_2673
KEGG: txy:Thexy_1883 hypothetical protein.
       0.455
Your Current Organism:
Thermoanaerobacterium saccharolyticum
NCBI taxonomy Id: 1094508
Other names: T. saccharolyticum JW/SL-YS485, Thermoanaerobacterium saccharolyticum JW/SL-YS485, Thermoanaerobacterium saccharolyticum str. JW/SL-YS485, Thermoanaerobacterium saccharolyticum strain JW/SL-YS485, Thermoanaerobacterium sp. (strain JW/SL YS485)
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