STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MEC_00391Iron-sulfur cluster assembly accessory protein; Belongs to the HesB/IscA family. (107 aa)    
Predicted Functional Partners:
MEC_00522
Hypothetical protein.
  
  
 0.792
MEC_00392
Hypothetical protein.
       0.783
MEC_00446
Hypothetical protein.
 
  
 0.704
MEC_00014
Hypothetical protein.
  
 
 0.693
GrxD
Grx4 family monothiol glutaredoxin; Belongs to the glutaredoxin family. Monothiol subfamily.
 
 0.686
MEC_00393
Hypothetical protein.
       0.620
glmU
glmU protein; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain.
       0.610
MEC_00689
Folate-binding protein YgfZ.
 
 
 0.608
dnaK
Chaperone dnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
 
 
 0.604
MEC_00390
Deoxyguanosinetriphosphate triphosphohydrolase-like protein; Belongs to the dGTPase family. Type 2 subfamily.
     
 0.581
Your Current Organism:
Bartonella alsatica
NCBI taxonomy Id: 1094551
Other names: B. alsatica IBS 382, Bartonella alsatica IBS 382, Bartonella alsatica str. IBS 382, Bartonella alsatica strain IBS 382
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.