G4YMI5_PHYSP protein (Phytophthora sojae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

G4YMI5_PHYSP

Pyruvate carboxyltransferase domain-containing protein. (575 aa)

Predicted Functional Partners:

G5A7Q7_PHYSP

0.981

G4YTE1_PHYSP

0.927

G4YMC6_PHYSP

0.875

G4YQB6_PHYSP

0.832

G4Z8C0_PHYSP

0.792

G4ZY38_PHYSP

0.734

G4ZA70_PHYSP

0.724

G4YFB4_PHYSP

0.676

G4YIE6_PHYSP

0.676

G4YIE7_PHYSP

0.676

Your Current Organism:

Phytophthora sojae

NCBI taxonomy Id: 1094619
Other names: P. sojae strain P6497, Phytophthora sojae strain P6497

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
G4YFB4_PHYSP	G4YMC6_PHYSP	G4YFB4	G4YMC6	Dimer_Tnp_hAT domain-containing protein.	ACT domain-containing protein.	0.531
G4YFB4_PHYSP	G4YMI5_PHYSP	G4YFB4	G4YMI5	Dimer_Tnp_hAT domain-containing protein.	Pyruvate carboxyltransferase domain-containing protein.	0.676
G4YFB4_PHYSP	G4YQB6_PHYSP	G4YFB4	G4YQB6	Dimer_Tnp_hAT domain-containing protein.	Acetolactate synthase.	0.535
G4YFB4_PHYSP	G4YTE1_PHYSP	G4YFB4	G4YTE1	Dimer_Tnp_hAT domain-containing protein.	Branched-chain-amino-acid aminotransferase; Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.	0.748
G4YFB4_PHYSP	G5A7Q7_PHYSP	G4YFB4	G5A7Q7	Dimer_Tnp_hAT domain-containing protein.	3-isopropylmalate dehydrogenase; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate.	0.603
G4YIE6_PHYSP	G4YMC6_PHYSP	G4YIE6	G4YMC6	Uncharacterized protein.	ACT domain-containing protein.	0.531
G4YIE6_PHYSP	G4YMI5_PHYSP	G4YIE6	G4YMI5	Uncharacterized protein.	Pyruvate carboxyltransferase domain-containing protein.	0.676
G4YIE6_PHYSP	G4YQB6_PHYSP	G4YIE6	G4YQB6	Uncharacterized protein.	Acetolactate synthase.	0.535
G4YIE6_PHYSP	G4YTE1_PHYSP	G4YIE6	G4YTE1	Uncharacterized protein.	Branched-chain-amino-acid aminotransferase; Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.	0.748
G4YIE6_PHYSP	G5A7Q7_PHYSP	G4YIE6	G5A7Q7	Uncharacterized protein.	3-isopropylmalate dehydrogenase; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate.	0.603
G4YIE7_PHYSP	G4YMC6_PHYSP	G4YIE7	G4YMC6	Dimer_Tnp_hAT domain-containing protein.	ACT domain-containing protein.	0.531
G4YIE7_PHYSP	G4YMI5_PHYSP	G4YIE7	G4YMI5	Dimer_Tnp_hAT domain-containing protein.	Pyruvate carboxyltransferase domain-containing protein.	0.676
G4YIE7_PHYSP	G4YQB6_PHYSP	G4YIE7	G4YQB6	Dimer_Tnp_hAT domain-containing protein.	Acetolactate synthase.	0.535
G4YIE7_PHYSP	G4YTE1_PHYSP	G4YIE7	G4YTE1	Dimer_Tnp_hAT domain-containing protein.	Branched-chain-amino-acid aminotransferase; Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.	0.748
G4YIE7_PHYSP	G5A7Q7_PHYSP	G4YIE7	G5A7Q7	Dimer_Tnp_hAT domain-containing protein.	3-isopropylmalate dehydrogenase; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate.	0.603
G4YMC6_PHYSP	G4YFB4_PHYSP	G4YMC6	G4YFB4	ACT domain-containing protein.	Dimer_Tnp_hAT domain-containing protein.	0.531
G4YMC6_PHYSP	G4YIE6_PHYSP	G4YMC6	G4YIE6	ACT domain-containing protein.	Uncharacterized protein.	0.531
G4YMC6_PHYSP	G4YIE7_PHYSP	G4YMC6	G4YIE7	ACT domain-containing protein.	Dimer_Tnp_hAT domain-containing protein.	0.531
G4YMC6_PHYSP	G4YMI5_PHYSP	G4YMC6	G4YMI5	ACT domain-containing protein.	Pyruvate carboxyltransferase domain-containing protein.	0.875
G4YMC6_PHYSP	G4YQB6_PHYSP	G4YMC6	G4YQB6	ACT domain-containing protein.	Acetolactate synthase.	0.999