STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G4YP32_PHYSPUncharacterized protein; Belongs to the DEAD box helicase family. (413 aa)    
Predicted Functional Partners:
G4Z033_PHYSP
YjeF N-terminal domain-containing protein.
  
 0.999
G4ZTT3_PHYSP
Sm domain-containing protein.
    
 0.996
LSM1
U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs.
   
 0.996
G4YM90_PHYSP
Nudix hydrolase domain-containing protein.
    
 0.993
G4YS21_PHYSP
mRNA_decap_C domain-containing protein.
   
 0.993
G4YEZ1_PHYSP
Uncharacterized protein.
   
 0.981
G4YNJ2_PHYSP
Uncharacterized protein.
   
 0.978
G4ZC82_PHYSP
Ge1_WD40 domain-containing protein.
    
 0.978
LSM4
U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.
    
 0.957
G4Z2S9_PHYSP
Uncharacterized protein.
   
 
 0.934
Your Current Organism:
Phytophthora sojae
NCBI taxonomy Id: 1094619
Other names: P. sojae strain P6497, Phytophthora sojae strain P6497
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.