G4ZR63_PHYSP protein (Phytophthora sojae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

G4ZR63_PHYSP

Ncstrn_small domain-containing protein. (724 aa)

Predicted Functional Partners:

G4YGT4_PHYSP

0.984

G5AGW3_PHYSP

0.956

G4ZQQ2_PHYSP

0.954

G4Z6U7_PHYSP

0.952

G4YHA8_PHYSP

0.562

G4ZJQ7_PHYSP

0.562

G5A5E0_PHYSP

0.562

G5AB73_PHYSP

0.562

G4ZL87_PHYSP

0.548

G4YMY1_PHYSP

0.498

Your Current Organism:

Phytophthora sojae

NCBI taxonomy Id: 1094619
Other names: P. sojae strain P6497, Phytophthora sojae strain P6497

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
G4YGT4_PHYSP	G4Z6U7_PHYSP	G4YGT4	G4Z6U7	Uncharacterized protein.	Uncharacterized protein.	0.921
G4YGT4_PHYSP	G4ZQQ2_PHYSP	G4YGT4	G4ZQQ2	Uncharacterized protein.	Uncharacterized protein.	0.921
G4YGT4_PHYSP	G4ZR63_PHYSP	G4YGT4	G4ZR63	Uncharacterized protein.	Ncstrn_small domain-containing protein.	0.984
G4YGT4_PHYSP	G5AGW3_PHYSP	G4YGT4	G5AGW3	Uncharacterized protein.	Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family.	0.921
G4YHA8_PHYSP	G4ZJQ7_PHYSP	G4YHA8	G4ZJQ7	Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family.	Pepsin-like aspartic protease A1; Belongs to the peptidase A1 family.	0.550
G4YHA8_PHYSP	G4ZR63_PHYSP	G4YHA8	G4ZR63	Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family.	Ncstrn_small domain-containing protein.	0.562
G4YHA8_PHYSP	G5A5E0_PHYSP	G4YHA8	G5A5E0	Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family.	Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family.	0.550
G4YHA8_PHYSP	G5AB73_PHYSP	G4YHA8	G5AB73	Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family.	Pepsin-like aspartic protease A1; Belongs to the peptidase A1 family.	0.630
G4YMY1_PHYSP	G4ZR63_PHYSP	G4YMY1	G4ZR63	Uncharacterized protein.	Ncstrn_small domain-containing protein.	0.498
G4Z6U7_PHYSP	G4YGT4_PHYSP	G4Z6U7	G4YGT4	Uncharacterized protein.	Uncharacterized protein.	0.921
G4Z6U7_PHYSP	G4ZR63_PHYSP	G4Z6U7	G4ZR63	Uncharacterized protein.	Ncstrn_small domain-containing protein.	0.952
G4ZJQ7_PHYSP	G4YHA8_PHYSP	G4ZJQ7	G4YHA8	Pepsin-like aspartic protease A1; Belongs to the peptidase A1 family.	Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family.	0.550
G4ZJQ7_PHYSP	G4ZR63_PHYSP	G4ZJQ7	G4ZR63	Pepsin-like aspartic protease A1; Belongs to the peptidase A1 family.	Ncstrn_small domain-containing protein.	0.562
G4ZL87_PHYSP	G4ZR63_PHYSP	G4ZL87	G4ZR63	GOLD domain-containing protein.	Ncstrn_small domain-containing protein.	0.548
G4ZQQ2_PHYSP	G4YGT4_PHYSP	G4ZQQ2	G4YGT4	Uncharacterized protein.	Uncharacterized protein.	0.921
G4ZQQ2_PHYSP	G4ZR63_PHYSP	G4ZQQ2	G4ZR63	Uncharacterized protein.	Ncstrn_small domain-containing protein.	0.954
G4ZR63_PHYSP	G4YGT4_PHYSP	G4ZR63	G4YGT4	Ncstrn_small domain-containing protein.	Uncharacterized protein.	0.984
G4ZR63_PHYSP	G4YHA8_PHYSP	G4ZR63	G4YHA8	Ncstrn_small domain-containing protein.	Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family.	0.562
G4ZR63_PHYSP	G4YMY1_PHYSP	G4ZR63	G4YMY1	Ncstrn_small domain-containing protein.	Uncharacterized protein.	0.498
G4ZR63_PHYSP	G4Z6U7_PHYSP	G4ZR63	G4Z6U7	Ncstrn_small domain-containing protein.	Uncharacterized protein.	0.952