STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001312405_00225Unannotated protein. (206 aa)    
Predicted Functional Partners:
GCA_001312405_00226
Unannotated protein.
  
  
 0.991
GCA_001312405_05387
Unannotated protein.
 
 
 0.975
GCA_001312405_05032
Unannotated protein.
  
 0.942
GCA_001312405_05948
Unannotated protein.
  
 
 0.937
GCA_001312405_01538
Unannotated protein.
  
 
 0.933
GCA_001312405_01539
Unannotated protein.
  
 
 0.933
GCA_001312405_00224
Unannotated protein.
  
  
 0.930
GCA_001312405_05031
Unannotated protein.
   
 0.929
GCA_001312405_04270
Unannotated protein.
     
 0.902
GCA_001312405_01567
Unannotated protein.
  
  
 0.880
Your Current Organism:
Clostridium sp. NkU1
NCBI taxonomy Id: 1095009
Other names: C. sp. NkU-1, Clostridium sp. JCM 10519, Clostridium sp. NkU-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.