STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001312405_03270Unannotated protein. (350 aa)    
Predicted Functional Partners:
GCA_001312405_03271
Unannotated protein.
 
 
  0.857
GCA_001312405_01933
Unannotated protein.
 
 
 0.837
GCA_001312405_04556
Unannotated protein.
 
 
 0.836
GCA_001312405_05586
Unannotated protein.
 
 
 0.833
GCA_001312405_05614
Unannotated protein.
 
 
 0.823
GCA_001312405_03273
Unannotated protein.
 
 
 0.780
GCA_001312405_03268
Unannotated protein.
       0.773
GCA_001312405_03269
Unannotated protein.
       0.773
GCA_001312405_05680
Unannotated protein.
  
     0.696
GCA_001312405_03272
Unannotated protein.
       0.686
Your Current Organism:
Clostridium sp. NkU1
NCBI taxonomy Id: 1095009
Other names: C. sp. NkU-1, Clostridium sp. JCM 10519, Clostridium sp. NkU-1
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.