STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0C9X2V9Unplaced genomic scaffold K443scaffold_217, whole genome shotgun sequence; Belongs to the iron/ascorbate-dependent oxidoreductase family. (356 aa)    
Predicted Functional Partners:
A0A0C9XE24
Autophagy-related protein 13; Belongs to the ATG13 family. Fungi subfamily.
   
 0.801
K443DRAFT_102
Unplaced genomic scaffold K443scaffold_1, whole genome shotgun sequence.
    
 0.792
A0A0C9X738
Unplaced genomic scaffold K443scaffold_390, whole genome shotgun sequence.
    
  0.596
A0A0C9XES1
Unplaced genomic scaffold K443scaffold_249, whole genome shotgun sequence.
    
  0.438
A0A0C9WH68
Unplaced genomic scaffold K443scaffold_598, whole genome shotgun sequence.
    
 
 0.435
A0A0C9WHI5
Unplaced genomic scaffold K443scaffold_497, whole genome shotgun sequence.
    
 
 0.435
A0A0C9WJ50
Unplaced genomic scaffold K443scaffold_275, whole genome shotgun sequence.
    
 
 0.435
A0A0C9WN27
Unplaced genomic scaffold K443scaffold_455, whole genome shotgun sequence.
    
 
 0.435
A0A0C9X202
Unplaced genomic scaffold K443scaffold_618, whole genome shotgun sequence.
    
 
 0.435
A0A0C9Y344
Unplaced genomic scaffold K443scaffold_7, whole genome shotgun sequence.
    
 
 0.435
Your Current Organism:
Laccaria amethystina
NCBI taxonomy Id: 1095629
Other names: L. amethystina LaAM-08-1, Laccaria amethystina LaAM-08-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.