STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0C9XCL6Unplaced genomic scaffold K443scaffold_114, whole genome shotgun sequence. (302 aa)    
Predicted Functional Partners:
A0A0C9XNE0
Unplaced genomic scaffold K443scaffold_16, whole genome shotgun sequence.
  
 0.887
A0A0C9XVP4
Unplaced genomic scaffold K443scaffold_4, whole genome shotgun sequence.
  
 0.887
A0A0C9Y5N6
Unplaced genomic scaffold K443scaffold_46, whole genome shotgun sequence.
    
 0.865
A0A0C9YCC9
Unplaced genomic scaffold K443scaffold_9, whole genome shotgun sequence.
   
 
 0.714
A0A0C9Y7A6
Acetolactate synthase.
    
 0.683
A0A0C9XTY3
Unplaced genomic scaffold K443scaffold_113, whole genome shotgun sequence.
    
 0.676
A0A0C9Y3S6
S-(hydroxymethyl)glutathione dehydrogenase; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
    
 0.676
A0A0C9XUT6
Threonine dehydratase.
   
 
  0.614
A0A0C9XXZ3
Unplaced genomic scaffold K443scaffold_17, whole genome shotgun sequence.
   
 
  0.614
A0A0C9YHJ4
Unplaced genomic scaffold K443scaffold_12, whole genome shotgun sequence.
   
 
  0.614
Your Current Organism:
Laccaria amethystina
NCBI taxonomy Id: 1095629
Other names: L. amethystina LaAM-08-1, Laccaria amethystina LaAM-08-1
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