STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0C9Y6Y3Unplaced genomic scaffold K443scaffold_41, whole genome shotgun sequence. (125 aa)    
Predicted Functional Partners:
A0A0C9Y807
Ribosomal protein; Belongs to the universal ribosomal protein uL1 family.
   
 0.973
A0A0C9YCU7
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
   
 
 0.971
A0A0C9XKK0
Unplaced genomic scaffold K443scaffold_24, whole genome shotgun sequence.
    
 0.966
A0A0C9X7L7
Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism.
    
 0.941
A0A0C9Y2U8
Unplaced genomic scaffold K443scaffold_8, whole genome shotgun sequence.
    
 0.941
A0A0C9XX99
Unplaced genomic scaffold K443scaffold_59, whole genome shotgun sequence.
    
 0.931
A0A0C9WVJ4
Unplaced genomic scaffold K443scaffold_350, whole genome shotgun sequence; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.925
A0A0C9X1E1
Unplaced genomic scaffold K443scaffold_232, whole genome shotgun sequence.
   
 0.914
A0A0C9YFC7
Unplaced genomic scaffold K443scaffold_4, whole genome shotgun sequence.
   
 0.914
A0A0C9X574
Unplaced genomic scaffold K443scaffold_13, whole genome shotgun sequence.
   
 0.910
Your Current Organism:
Laccaria amethystina
NCBI taxonomy Id: 1095629
Other names: L. amethystina LaAM-08-1, Laccaria amethystina LaAM-08-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.