STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0C9Y896Exportin-T; tRNA nucleus export receptor which facilitates tRNA translocation across the nuclear pore complex. Belongs to the exportin family. (1059 aa)    
Predicted Functional Partners:
A0A0C9YCU7
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
   
 0.997
K443DRAFT_530
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
 
 
 
 0.826
A0A0C9X3P5
Unplaced genomic scaffold K443scaffold_386, whole genome shotgun sequence.
    
 
 0.818
A0A0C9XEM9
Unplaced genomic scaffold K443scaffold_46, whole genome shotgun sequence.
   
 
 0.786
A0A0C9X633
Unplaced genomic scaffold K443scaffold_11, whole genome shotgun sequence.
   
  
 0.784
A0A0C9WNA5
Unplaced genomic scaffold K443scaffold_123, whole genome shotgun sequence.
   
 
 0.770
A0A0C9XD74
Tyrosine--tRNA ligase.
   
 
 0.767
K443DRAFT_4074
Unplaced genomic scaffold K443scaffold_28, whole genome shotgun sequence; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 
 0.767
A0A0C9XY20
Unplaced genomic scaffold K443scaffold_2, whole genome shotgun sequence.
   
 
 0.734
A0A0C9XP65
Unplaced genomic scaffold K443scaffold_15, whole genome shotgun sequence.
    
   0.696
Your Current Organism:
Laccaria amethystina
NCBI taxonomy Id: 1095629
Other names: L. amethystina LaAM-08-1, Laccaria amethystina LaAM-08-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.