STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EID32881.1Transcriptional regulator, AsnC family. (154 aa)    
Predicted Functional Partners:
nifJ
Pyruvate synthase.
    
 0.740
EID32978.1
Peptidase C26 / membrane dipeptidase family M10 multi-domain protein.
       0.721
EID32866.1
Peptidase, M28 family.
       0.681
EID32872.1
Periplasmic-binding protein domain / histidine kinase A domain / GHKL domain / response regulator receiver domain / DNA-binding helix-turn-helix multi-domain protein.
  
  
 0.580
EID32899.1
Peptidyl-prolyl cis-trans isomerase, FKBP-type.
       0.492
EID32961.1
Peptidyl-prolyl cis-trans isomerase, FKBP-type.
       0.492
EID34123.1
2-oxoacid:acceptor oxidoreductase, alpha subunit.
    
  0.460
EID33773.1
Two component regulator propeller / conserved hypothetical / histidine kinase A domain / GHKL domain / response regulator receiver domain / DNA-binding helix-turn-helix multi-domain protein.
  
  
 0.436
Your Current Organism:
Prevotella sp. F0472
NCBI taxonomy Id: 1095752
Other names: P. sp. oral taxon 306 str. F0472, Prevotella sp. oral taxon 306 str. F0472
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.