STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000321045_02487Unannotated protein. (335 aa)    
Predicted Functional Partners:
GCA_000321045_02105
Unannotated protein.
    
 
 0.878
GCA_000321045_02729
Unannotated protein.
    
 0.790
GCA_000321045_04077
Unannotated protein.
    
 0.790
GCA_000321045_04564
Unannotated protein.
    
 0.790
GCA_000321045_00374
Unannotated protein.
  
 
  
0.618
GCA_000321045_02488
Unannotated protein.
       0.504
GCA_000321045_02489
Unannotated protein.
       0.504
GCA_000321045_00099
Unannotated protein.
    
   0.459
GCA_000321045_00083
Unannotated protein.
     
 0.445
GCA_000321045_01278
Unannotated protein.
     
 0.445
Your Current Organism:
Metakosakonia massiliensis
NCBI taxonomy Id: 1095768
Other names: Enterobacter massiliensis JC163, Enterobacter sp. JC163, M. massiliensis JC163, Metakosakonia massiliensis JC163
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.