STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000312045_01420Unannotated protein. (200 aa)    
Predicted Functional Partners:
GCA_000312045_01421
Unannotated protein.
  
 0.991
GCA_000312045_01422
Unannotated protein.
 
 0.964
GCA_000312045_00290
Unannotated protein.
    
 0.946
GCA_000312045_00291
Unannotated protein.
    
 0.938
GCA_000312045_00258
Unannotated protein.
    
 0.907
GCA_000312045_01286
Unannotated protein.
    
 0.907
GCA_000312045_01711
Unannotated protein.
   
 0.762
GCA_000312045_03107
Unannotated protein.
   
 0.762
GCA_000312045_01746
Unannotated protein.
 
  
 0.755
GCA_000312045_01802
Unannotated protein.
  
 
 0.754
Your Current Organism:
Noviherbaspirillum massiliense
NCBI taxonomy Id: 1095769
Other names: Herbaspirillum massiliense JC206, Herbaspirillum sp. JC206, N. massiliense JC206, Noviherbaspirillum massiliense JC206
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.