STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000312045_03319Unannotated protein. (310 aa)    
Predicted Functional Partners:
GCA_000312045_03320
Unannotated protein.
 
 0.999
GCA_000312045_03322
Unannotated protein.
 
  0.989
GCA_000312045_03321
Unannotated protein.
 
 0.979
GCA_000312045_00919
Unannotated protein.
 
 0.978
GCA_000312045_03151
Unannotated protein.
 
  0.977
GCA_000312045_00516
Unannotated protein.
 
  0.973
GCA_000312045_03481
Unannotated protein.
 
 
  0.969
GCA_000312045_00642
Unannotated protein.
 
  0.962
GCA_000312045_03323
Unannotated protein.
 
 
  0.955
GCA_000312045_00644
Unannotated protein.
 
 
  0.954
Your Current Organism:
Noviherbaspirillum massiliense
NCBI taxonomy Id: 1095769
Other names: Herbaspirillum massiliense JC206, Herbaspirillum sp. JC206, N. massiliense JC206, Noviherbaspirillum massiliense JC206
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.