STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000312045_03639Unannotated protein. (442 aa)    
Predicted Functional Partners:
GCA_000312045_00314
Unannotated protein.
   
 0.927
GCA_000312045_01103
Unannotated protein.
  
 
 0.877
GCA_000312045_00602
Unannotated protein.
   
 0.698
GCA_000312045_00116
Unannotated protein.
  
 0.688
GCA_000312045_00871
Unannotated protein.
   
  0.677
GCA_000312045_02574
Unannotated protein.
   
  0.677
GCA_000312045_03777
Unannotated protein.
   
  0.677
GCA_000312045_02074
Unannotated protein.
  
 
 0.632
GCA_000312045_02103
Unannotated protein.
  
 0.631
GCA_000312045_01716
Unannotated protein.
   
   0.622
Your Current Organism:
Noviherbaspirillum massiliense
NCBI taxonomy Id: 1095769
Other names: Herbaspirillum massiliense JC206, Herbaspirillum sp. JC206, N. massiliense JC206, Noviherbaspirillum massiliense JC206
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.