STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000312045_03754Unannotated protein. (836 aa)    
Predicted Functional Partners:
GCA_000312045_03753
Unannotated protein.
 
   
 0.888
GCA_000312045_00259
Unannotated protein.
   
  0.874
GCA_000312045_00502
Unannotated protein.
    
   0.714
GCA_000312045_03312
Unannotated protein.
  
 
  0.703
GCA_000312045_02916
Unannotated protein.
     
 0.696
GCA_000312045_03752
Unannotated protein.
 
     0.684
GCA_000312045_03110
Unannotated protein.
  
  0.682
GCA_000312045_01005
Unannotated protein.
 
     0.681
GCA_000312045_00117
Unannotated protein.
    
  0.643
GCA_000312045_00501
Unannotated protein.
   
   0.622
Your Current Organism:
Noviherbaspirillum massiliense
NCBI taxonomy Id: 1095769
Other names: Herbaspirillum massiliense JC206, Herbaspirillum sp. JC206, N. massiliense JC206, Noviherbaspirillum massiliense JC206
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.