STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ38558.1Pimeloyl-ACP methyl ester carboxylesterase. (265 aa)    
Predicted Functional Partners:
SDK98182.1
Phosphoesterase, MJ0936 family.
    
 0.713
SDK35439.1
Pimeloyl-ACP methyl ester carboxylesterase.
  
     0.633
SDL06098.1
Pimeloyl-ACP methyl ester carboxylesterase.
  
     0.632
SDJ61289.1
2-oxoacid dehydrogenases acyltransferase (catalytic domain).
    
 0.567
SDL02310.1
Pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase).
    
 0.567
SDJ42104.1
Pimeloyl-ACP methyl ester carboxylesterase.
  
     0.541
SDK78402.1
Uncharacterized conserved protein YurZ, alkylhydroperoxidase/carboxymuconolactone decarboxylase family.
 
  
 0.523
menD
2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase; Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2- succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC).
  
 
 0.519
SDJ98304.1
Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
  
  
 0.517
SDJ56813.1
Polyhydroxyalkanoate synthase.
  
  
 0.514
Your Current Organism:
Natronorubrum texcoconense
NCBI taxonomy Id: 1095776
Other names: CECT 8067, DSM 25211, JCM 17497, N. texcoconense, Natronorubrum sp. B4, Natronorubrum texcoconense Ruiz-Romero et al. 2013, strain B4
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