STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ47206.1Ferredoxin subunit of nitrite reductase or a ring-hydroxylating dioxygenase. (134 aa)    
Predicted Functional Partners:
SDK21919.1
Nitrate reductase beta subunit.
  
 
 0.856
SDJ33533.1
Pyridine nucleotide-disulphide oxidoreductase.
  
 0.827
SDJ51900.1
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase.
  
 0.827
SDJ39385.1
Cytochrome c oxidase subunit I+III; Belongs to the heme-copper respiratory oxidase family.
    
 0.805
SDJ65660.1
Cytochrome c oxidase subunit I+III; Belongs to the heme-copper respiratory oxidase family.
    
 0.805
SDJ89318.1
NADH dehydrogenase subunit C /NADH dehydrogenase subunit D.
     
 0.698
SDK99795.1
uroporphyrin-III C-methyltransferase.
  
  
 0.677
SDL01055.1
MFS transporter, NNP family, nitrate/nitrite transporter.
  
 
 0.639
SDJ47174.1
Enamine deaminase RidA, house cleaning of reactive enamine intermediates, YjgF/YER057c/UK114 family.
     
 0.618
SDJ36561.1
Glutamate synthase (NADPH/NADH) large chain.
     
 0.594
Your Current Organism:
Natronorubrum texcoconense
NCBI taxonomy Id: 1095776
Other names: CECT 8067, DSM 25211, JCM 17497, N. texcoconense, Natronorubrum sp. B4, Natronorubrum texcoconense Ruiz-Romero et al. 2013, strain B4
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.