STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ51573.1Response regulator receiver domain-containing protein. (167 aa)    
Predicted Functional Partners:
SDK42955.1
Signal transduction histidine kinase.
  
 0.819
SDK54551.1
Monosaccharide ABC transporter substrate-binding protein, CUT2 family.
   
 0.739
SDK58345.1
Predicted DNA binding protein, contains HTH domain.
 
 
 0.678
SDJ41263.1
Methyl-accepting chemotaxis protein.
  
 0.660
SDJ58216.1
Methyl-accepting chemotaxis protein.
  
 0.660
SDJ42653.1
PAS domain S-box-containing protein.
 
  
  0.647
SDJ93544.1
Two-component system, chemotaxis family, sensor kinase CheA.
  
 
 0.640
SDK73715.1
PAS domain S-box-containing protein.
  
  
  0.638
cheB
Two-component system, chemotaxis family, response regulator CheB; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
  
 0.636
SDL04612.1
PAS domain S-box-containing protein.
 
  
  0.629
Your Current Organism:
Natronorubrum texcoconense
NCBI taxonomy Id: 1095776
Other names: CECT 8067, DSM 25211, JCM 17497, N. texcoconense, Natronorubrum sp. B4, Natronorubrum texcoconense Ruiz-Romero et al. 2013, strain B4
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