STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ57230.1Conserved TM helix. (254 aa)    
Predicted Functional Partners:
dacZ
Diadenylate cyclase (c-di-AMP synthetase), DisA_N domain; Diadenylate cyclase that catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP). c-di-AMP is a second messenger for intracellular signal transduction involved in the control of important regulatory processes such as osmoregulation.
   
 0.957
SDK37619.1
Nonsense-mediated mRNA decay protein 3.
   
    0.583
SDJ91467.1
Mechanosensitive ion channel.
  
     0.498
SDJ54540.1
Small-conductance mechanosensitive channel.
  
     0.491
SDK68484.1
Mechanosensitive ion channel.
  
     0.491
SDJ49263.1
Mechanosensitive ion channel.
  
     0.462
SDK92737.1
NhaP-type Na+/H+ or K+/H+ antiporter.
 
   
 0.462
SDJ54115.1
NhaP-type Na+/H+ or K+/H+ antiporter.
 
   
 0.461
SDK15026.1
Small-conductance mechanosensitive channel.
  
     0.460
Your Current Organism:
Natronorubrum texcoconense
NCBI taxonomy Id: 1095776
Other names: CECT 8067, DSM 25211, JCM 17497, N. texcoconense, Natronorubrum sp. B4, Natronorubrum texcoconense Ruiz-Romero et al. 2013, strain B4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.