STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ59541.1Thiamine transport system ATP-binding protein. (349 aa)    
Predicted Functional Partners:
SDJ64370.1
Molybdate/tungstate transport system permease protein.
  
  0.997
SDJ59563.1
Thiamine transport system permease protein.
 
  0.990
SDJ35440.1
Molybdopterin molybdochelatase.
 
 
 0.988
SDJ59594.1
Thiamine transport system substrate-binding protein.
    
  0.975
SDK56276.1
Putative spermidine/putrescine transport system permease protein.
 
  
 0.970
SDK56214.1
Putative spermidine/putrescine transport system permease protein.
  
 0.967
SDK97437.1
iron(III) transport system permease protein.
 
  0.958
SDJ64324.1
Tungstate/molybdate binding protein.
  
 
 0.944
SDK04333.1
Tungstate transport system permease protein.
   
 0.932
SDK04361.1
Tungstate transport system substrate-binding protein.
    
 0.925
Your Current Organism:
Natronorubrum texcoconense
NCBI taxonomy Id: 1095776
Other names: CECT 8067, DSM 25211, JCM 17497, N. texcoconense, Natronorubrum sp. B4, Natronorubrum texcoconense Ruiz-Romero et al. 2013, strain B4
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.