STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ59960.1ABC-2 type transport system permease protein. (278 aa)    
Predicted Functional Partners:
SDJ59936.1
ABC-2 type transport system ATP-binding protein.
 
 0.971
SDJ38876.1
ABC-2 type transport system ATP-binding protein.
 
 0.853
SDK40911.1
ABC-2 type transport system ATP-binding protein.
 
 0.686
SDJ87663.1
ABC-2 type transport system ATP-binding protein.
 
 0.671
SDJ33896.1
ABC-2 type transport system ATP-binding protein.
 
 0.650
SDJ44176.1
ABC-2 type transport system ATP-binding protein.
 
 0.640
SDK02878.1
ABC-2 type transport system ATP-binding protein.
 
 0.627
SDK90927.1
ABC-2 type transport system ATP-binding protein.
 
 0.626
SDK43970.1
Cu-processing system ATP-binding protein.
 
 0.622
SDK44373.1
ABC-2 type transport system ATP-binding protein.
 
 0.615
Your Current Organism:
Natronorubrum texcoconense
NCBI taxonomy Id: 1095776
Other names: CECT 8067, DSM 25211, JCM 17497, N. texcoconense, Natronorubrum sp. B4, Natronorubrum texcoconense Ruiz-Romero et al. 2013, strain B4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.