STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ82276.1Ferredoxin. (113 aa)    
Predicted Functional Partners:
SDJ89318.1
NADH dehydrogenase subunit C /NADH dehydrogenase subunit D.
  
 
 0.999
SDK37853.1
Nitrogen fixation protein NifU.
  
 0.866
SDJ64970.1
Cytochrome P450.
  
 0.838
hcp
Hydroxylamine reductase; Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O.
   
 0.824
SDJ33533.1
Pyridine nucleotide-disulphide oxidoreductase.
  
 0.817
SDJ51900.1
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase.
  
 0.817
SDK36256.1
Ferredoxin-nitrite reductase.
 
 
 0.815
SDJ51147.1
Ferredoxin-nitrite reductase.
 
 
 0.810
SDK38627.1
Ferredoxin-nitrite reductase.
 
 
 0.810
SDJ89260.1
NADH dehydrogenase subunit A.
 
 
 
 0.785
Your Current Organism:
Natronorubrum texcoconense
NCBI taxonomy Id: 1095776
Other names: CECT 8067, DSM 25211, JCM 17497, N. texcoconense, Natronorubrum sp. B4, Natronorubrum texcoconense Ruiz-Romero et al. 2013, strain B4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.