STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ85948.1Acyl-CoA dehydrogenase. (380 aa)    
Predicted Functional Partners:
SDK77504.1
Electron transfer flavoprotein alpha subunit apoprotein.
 0.973
SDJ57830.1
Electron transfer flavoprotein, alpha subunit.
 0.911
SDJ49751.1
Predicted kinase, aminoglycoside phosphotransferase (APT) family.
 
 0.899
SDJ57850.1
Electron transfer flavoprotein beta subunit.
 
 0.897
SDK77472.1
Electron transfer flavoprotein beta subunit.
 
 0.893
SDJ89318.1
NADH dehydrogenase subunit C /NADH dehydrogenase subunit D.
   
 0.867
SDJ85980.1
Hypothetical protein.
       0.727
SDK47016.1
Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family.
   
 0.689
SDK92498.1
Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family.
   
 0.689
SDJ89378.1
NADH-quinone oxidoreductase subunit I.
  
 0.683
Your Current Organism:
Natronorubrum texcoconense
NCBI taxonomy Id: 1095776
Other names: CECT 8067, DSM 25211, JCM 17497, N. texcoconense, Natronorubrum sp. B4, Natronorubrum texcoconense Ruiz-Romero et al. 2013, strain B4
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