STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ90780.1acetyl-CoA C-acetyltransferase/acetyl-CoA acyltransferase. (49 aa)    
Predicted Functional Partners:
SDJ63975.1
hydroxymethylglutaryl-CoA synthase.
  
 0.961
SDK80258.1
3-hydroxyacyl-CoA dehydrogenase.
   
 0.927
SDJ94844.1
3-hydroxyacyl-CoA dehydrogenase /Enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
   
 0.925
SDK69614.1
hydroxymethylglutaryl-CoA synthase.
  
 0.919
SDJ63171.1
Hypothetical protein.
  
 0.902
SDK59493.1
Hypothetical protein.
  
 0.902
SDK61970.1
Hypothetical protein.
  
 0.859
SDK62607.1
Hypothetical protein.
  
 0.859
SDK92498.1
Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.849
SDJ85534.1
Enoyl-CoA hydratase/carnithine racemase.
  
 0.847
Your Current Organism:
Natronorubrum texcoconense
NCBI taxonomy Id: 1095776
Other names: CECT 8067, DSM 25211, JCM 17497, N. texcoconense, Natronorubrum sp. B4, Natronorubrum texcoconense Ruiz-Romero et al. 2013, strain B4
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