STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDK19939.1acetyl-CoA C-acetyltransferase. (386 aa)    
Predicted Functional Partners:
SDJ63975.1
hydroxymethylglutaryl-CoA synthase.
 
 0.986
SDK80258.1
3-hydroxyacyl-CoA dehydrogenase.
   
 0.972
SDJ94844.1
3-hydroxyacyl-CoA dehydrogenase /Enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
   
 0.970
SDK19912.1
Hypothetical protein.
  
 0.962
SDK69614.1
hydroxymethylglutaryl-CoA synthase.
 
 0.955
SDJ42497.1
Citrate synthase.
  
 0.932
SDJ46742.1
2-isopropylmalate synthase; Manually curated; Belongs to the alpha-IPM synthase/homocitrate synthase family.
  
 
 0.920
SDK22337.1
Acetyltransferase.
  
 
 0.918
SDK59493.1
Hypothetical protein.
 
 0.918
SDJ63171.1
Hypothetical protein.
 
 0.916
Your Current Organism:
Natronorubrum texcoconense
NCBI taxonomy Id: 1095776
Other names: CECT 8067, DSM 25211, JCM 17497, N. texcoconense, Natronorubrum sp. B4, Natronorubrum texcoconense Ruiz-Romero et al. 2013, strain B4
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