STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
matMethionine adenosyltransferase; Catalyzes the formation of S-adenosylmethionine from methionine and ATP; Belongs to the AdoMet synthase 2 family. (401 aa)    
Predicted Functional Partners:
SDJ54620.1
5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase.
  
  
 0.933
SDJ54654.1
Methionine synthase (B12-independent).
     
 0.923
SDK21415.1
Adenylate cyclase.
 
     0.766
gap
Glyceraldehyde 3-phosphate dehydrogenase (NAD(P)+).
  
  
  0.660
SDK21443.1
FKBP-type peptidyl-prolyl cis-trans isomerase SlyD.
 
    0.654
tpiA
Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.
  
  
  0.615
rpl44e
LSU ribosomal protein L44E; Binds to the 23S rRNA.
  
     0.587
SDK73868.1
Putative transcriptional regulator.
  
     0.582
pgk
Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
  
  
  0.574
SDJ89096.1
Aspartate aminotransferase.
     
 0.550
Your Current Organism:
Natronorubrum texcoconense
NCBI taxonomy Id: 1095776
Other names: CECT 8067, DSM 25211, JCM 17497, N. texcoconense, Natronorubrum sp. B4, Natronorubrum texcoconense Ruiz-Romero et al. 2013, strain B4
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