STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rpl37aeLarge subunit ribosomal protein L37Ae; Binds to the 23S rRNA; Belongs to the eukaryotic ribosomal protein eL43 family. (87 aa)    
Predicted Functional Partners:
rpl40e
Ribosomal protein L40E; Belongs to the eukaryotic ribosomal protein eL40 family.
  
 
 0.999
rps24e
Small subunit ribosomal protein S24e; Belongs to the eukaryotic ribosomal protein eS24 family.
  
 
 0.999
rpl15e
LSU ribosomal protein L15E; Belongs to the eukaryotic ribosomal protein eL15 family.
 
 
 0.999
rpl37e
LSU ribosomal protein L37E; Binds to the 23S rRNA; Belongs to the eukaryotic ribosomal protein eL37 family.
  
 
 0.999
rpl21e
LSU ribosomal protein L21E; Belongs to the eukaryotic ribosomal protein eL21 family.
 
 
 0.999
rpl24e
Large subunit ribosomal protein L24e; Binds to the 23S rRNA; Belongs to the eukaryotic ribosomal protein eL24 family.
 
 
 0.999
rps28e
SSU ribosomal protein S28E; Belongs to the eukaryotic ribosomal protein eS28 family.
   
 
 0.999
rpl7ae
LSU ribosomal protein L7AE; Multifunctional RNA-binding protein that recognizes the K- turn motif in ribosomal RNA, the RNA component of RNase P, box H/ACA, box C/D and box C'/D' sRNAs.
  
 
 0.999
rps2
SSU ribosomal protein S2P; Belongs to the universal ribosomal protein uS2 family.
   
 
 0.999
rps9
SSU ribosomal protein S9P; Belongs to the universal ribosomal protein uS9 family.
 
 
 0.999
Your Current Organism:
Natronorubrum texcoconense
NCBI taxonomy Id: 1095776
Other names: CECT 8067, DSM 25211, JCM 17497, N. texcoconense, Natronorubrum sp. B4, Natronorubrum texcoconense Ruiz-Romero et al. 2013, strain B4
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.