STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDK39235.1CBS domain-containing protein. (317 aa)    
Predicted Functional Partners:
SDJ56813.1
Polyhydroxyalkanoate synthase.
 
  
 0.655
SDK71221.1
Catalase.
   
 0.632
SDJ61289.1
2-oxoacid dehydrogenases acyltransferase (catalytic domain).
  
 
  0.624
SDK39292.1
Dephospho-CoA kinase.
 
   
 0.608
SDL02310.1
Pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase).
   
 
  0.574
SDL04205.1
Hypothetical protein.
  
  0.563
SDJ63171.1
Hypothetical protein.
  
  0.563
SDJ95548.1
Hypothetical protein.
  
  0.563
SDK19912.1
Hypothetical protein.
  
  0.563
SDK59493.1
Hypothetical protein.
  
  0.563
Your Current Organism:
Natronorubrum texcoconense
NCBI taxonomy Id: 1095776
Other names: CECT 8067, DSM 25211, JCM 17497, N. texcoconense, Natronorubrum sp. B4, Natronorubrum texcoconense Ruiz-Romero et al. 2013, strain B4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.