STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDK54668.1Alpha-galactosidase. (484 aa)    
Predicted Functional Partners:
SDK54169.1
Glycosyl hydrolases family 2.
  
  
 0.624
SDK54718.1
Beta-glucosidase.
  
  
 0.607
SDJ83229.1
Beta-mannosidase.
  
  
 0.590
SDJ40161.1
Glucokinase.
    
 0.569
SDK54626.1
Nucleotide-binding universal stress protein, UspA family.
       0.559
SDK54860.1
D-glucuronate isomerase.
  
  
  0.559
SDK54099.1
Alpha-galactosidase.
  
  
 
0.558
SDJ46280.1
L-fuculose 1-phosphate aldolase.
   
 
 0.535
SDK56304.1
Polysaccharide deacetylase.
     
 0.535
SDJ46342.1
Acetyl esterase.
    
  0.533
Your Current Organism:
Natronorubrum texcoconense
NCBI taxonomy Id: 1095776
Other names: CECT 8067, DSM 25211, JCM 17497, N. texcoconense, Natronorubrum sp. B4, Natronorubrum texcoconense Ruiz-Romero et al. 2013, strain B4
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.