STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDK56006.1Hypothetical protein. (658 aa)    
Predicted Functional Partners:
SDK90901.1
Phage integrase family protein.
  
   
 0.639
SDK20388.1
Methyltransferase domain-containing protein.
  
     0.626
SDK91025.1
Phage integrase, N-terminal SAM-like domain.
  
   
 0.618
SDK47497.1
Uncharacterized protein.
  
     0.615
SDJ57800.1
Electron transfer flavoprotein-quinone oxidoreductase.
  
     0.604
SDJ40215.1
Uncharacterized conserved protein.
  
     0.599
SDK55975.1
Hypothetical protein.
       0.590
SDL09325.1
Site-specific recombinase XerD.
  
   
 0.574
crcB-2
CrcB protein; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family.
  
     0.567
SDJ80975.1
Acetyltransferase (GNAT) family protein.
  
     0.545
Your Current Organism:
Natronorubrum texcoconense
NCBI taxonomy Id: 1095776
Other names: CECT 8067, DSM 25211, JCM 17497, N. texcoconense, Natronorubrum sp. B4, Natronorubrum texcoconense Ruiz-Romero et al. 2013, strain B4
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