STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDK57111.1Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family. (234 aa)    
Predicted Functional Partners:
SDK57191.1
Amino acid/amide ABC transporter membrane protein 2, HAAT family.
 
 0.997
SDK58199.1
Amino acid/amide ABC transporter membrane protein 2, HAAT family.
 
 0.991
SDJ84308.1
Amino acid/amide ABC transporter membrane protein 2, HAAT family.
 
 0.989
SDJ50008.1
Amino acid/amide ABC transporter membrane protein 1, HAAT family /amino acid/amide ABC transporter membrane protein 2, HAAT family.
 
 0.986
SDK57218.1
Branched-chain amino acid transport system permease protein.
 
 0.981
SDK57250.1
Branched-chain amino acid transport system substrate-binding protein.
 
 
 0.979
SDK59642.1
Branched-chain amino acid transport system permease protein.
 
 0.953
SDK57153.1
Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family.
 
 
0.948
SDK19133.1
Branched-chain amino acid transport system permease protein.
 
 0.938
SDK19096.1
Amino acid/amide ABC transporter membrane protein 1, HAAT family.
 
 0.895
Your Current Organism:
Natronorubrum texcoconense
NCBI taxonomy Id: 1095776
Other names: CECT 8067, DSM 25211, JCM 17497, N. texcoconense, Natronorubrum sp. B4, Natronorubrum texcoconense Ruiz-Romero et al. 2013, strain B4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.