STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDK61197.1PAS domain S-box-containing protein. (1084 aa)    
Predicted Functional Partners:
SDJ93672.1
Chemotaxis protein methyltransferase CheR.
  
  
  0.490
SDJ42484.1
Predicted arabinose efflux permease, MFS family.
  
     0.489
SDL01230.1
PAS domain S-box-containing protein.
  
     0.468
SDK61218.1
Hypothetical protein.
       0.463
SDK61874.1
Sugar phosphate permease.
  
     0.458
SDJ93544.1
Two-component system, chemotaxis family, sensor kinase CheA.
  
  
  0.451
cheB
Two-component system, chemotaxis family, response regulator CheB; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
  
  
  0.449
SDK61169.1
Hypothetical protein.
       0.410
SDK61934.1
Sugar phosphate permease.
  
     0.400
Your Current Organism:
Natronorubrum texcoconense
NCBI taxonomy Id: 1095776
Other names: CECT 8067, DSM 25211, JCM 17497, N. texcoconense, Natronorubrum sp. B4, Natronorubrum texcoconense Ruiz-Romero et al. 2013, strain B4
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