STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDK69791.1Succinylglutamate desuccinylase / Aspartoacylase family protein. (270 aa)    
Predicted Functional Partners:
SDK69824.1
Hypothetical protein.
       0.773
SDJ39385.1
Cytochrome c oxidase subunit I+III; Belongs to the heme-copper respiratory oxidase family.
  
  
  0.724
SDJ65660.1
Cytochrome c oxidase subunit I+III; Belongs to the heme-copper respiratory oxidase family.
  
  
  0.724
SDJ94314.1
Hypothetical protein.
  
     0.569
SDK69842.1
Hypothetical protein.
       0.559
SDK24290.1
Hypothetical protein.
  
     0.558
SDK04057.1
Predicted deacylase.
  
     0.551
SDK74638.1
Cytochrome c oxidase subunit 1; Belongs to the heme-copper respiratory oxidase family.
  
  
  0.548
SDK60334.1
SH3 domain-containing protein.
  
  
  0.538
SDJ88237.1
Asparagine synthase.
  
     0.529
Your Current Organism:
Natronorubrum texcoconense
NCBI taxonomy Id: 1095776
Other names: CECT 8067, DSM 25211, JCM 17497, N. texcoconense, Natronorubrum sp. B4, Natronorubrum texcoconense Ruiz-Romero et al. 2013, strain B4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.