STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDK85707.1NRAMP (natural resistance-associated macrophage protein) metal ion transporters. (414 aa)    
Predicted Functional Partners:
SDK85796.1
Maleate isomerase.
       0.784
SDK85737.1
N-methylhydantoinase A.
       0.693
SDK22367.1
Zinc transport system permease protein.
   
  
 0.691
SDK85765.1
N-methylhydantoinase B.
       0.691
SDJ32617.1
UPF0271 protein.
 
  
 0.583
SDK22398.1
Zinc transport system ATP-binding protein.
  
  
 0.506
SDK85677.1
Ribbon-helix-helix protein, copG family.
       0.495
SDK22432.1
Zinc transport system substrate-binding protein.
  
  
 0.463
SDJ32693.1
Biotin-dependent carboxylase uncharacterized domain-containing protein.
  
  
 0.445
SDJ32723.1
Urea carboxylase.
  
  
 0.441
Your Current Organism:
Natronorubrum texcoconense
NCBI taxonomy Id: 1095776
Other names: CECT 8067, DSM 25211, JCM 17497, N. texcoconense, Natronorubrum sp. B4, Natronorubrum texcoconense Ruiz-Romero et al. 2013, strain B4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.