STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDK89654.1Glycosyltransferase involved in cell wall bisynthesis. (321 aa)    
Predicted Functional Partners:
SDJ47763.1
Dienelactone hydrolase.
   
 
 0.672
SDK90781.1
Alpha/beta hydrolase family protein.
   
 
 0.672
SDJ88509.1
Hypothetical protein.
 
     0.633
SDJ60468.1
Hypothetical protein.
 
     0.630
SDJ46399.1
UDPglucose 6-dehydrogenase.
  
 
 0.620
SDK98182.1
Phosphoesterase, MJ0936 family.
    
 0.617
SDJ68309.1
Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase.
 
  
 0.573
pgi
Glucose-6-phosphate isomerase; Belongs to the GPI family.
 
 
 0.563
SDK94948.1
Membrane protein involved in the export of O-antigen and teichoic acid.
 
 
 0.563
SDK89679.1
Hypothetical protein.
 
     0.559
Your Current Organism:
Natronorubrum texcoconense
NCBI taxonomy Id: 1095776
Other names: CECT 8067, DSM 25211, JCM 17497, N. texcoconense, Natronorubrum sp. B4, Natronorubrum texcoconense Ruiz-Romero et al. 2013, strain B4
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