STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ETA69639.1Hypothetical protein; IMG reference gene:2510909203. (75 aa)    
Predicted Functional Partners:
argC
N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily.
       0.773
ETA69640.1
IMG reference gene:2510909204; PFAM: Homoserine dehydrogenase; Homoserine dehydrogenase, NAD binding domain; ACT domain.
       0.773
ETA69641.1
Putative permease; IMG reference gene:2510909205; PFAM: Membrane transport protein.
       0.773
ETA69642.1
Putative permease; IMG reference gene:2510909206; PFAM: EamA-like transporter family.
       0.727
rplM
LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.
       0.661
rpsI
Ribosomal protein S9; IMG reference gene:2510909201; PFAM: Ribosomal protein S9/S16; Belongs to the universal ribosomal protein uS9 family.
       0.661
ETA69635.1
O-acetylhomoserine sulfhydrylase; IMG reference gene:2510909199; PFAM: Cys/Met metabolism PLP-dependent enzyme; TIGRFAM: OAH/OAS sulfhydrylase.
       0.424
Your Current Organism:
Pelagibacter ubique HIMB083
NCBI taxonomy Id: 1096769
Other names: C. Pelagibacter ubique HIMB083, Candidatus Pelagibacter ubique HIMB083, Candidatus Pelagibacter ubique str. HIMB083, Candidatus Pelagibacter ubique strain HIMB083
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.