STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ETA70197.1ABC-type multidrug transport system, ATPase and permease component; IMG reference gene:2510909776; PFAM: ABC transporter; ABC transporter transmembrane region. (596 aa)    
Predicted Functional Partners:
ETA70511.1
ABC-type bacteriocin/lantibiotic exporter with N-terminal double-glycine peptidase domain; IMG reference gene:2510910100; PFAM: ABC transporter.
 
 
 
0.954
ETA70609.1
ABC-type multidrug transport system, ATPase and permease component; IMG reference gene:2510910198; PFAM: ABC transporter; ABC transporter transmembrane region.
 
 
 
0.947
ETA70149.1
ABC-type multidrug transport system, ATPase component; IMG reference gene:2510909725; PFAM: ABC transporter.
  
  
 
0.838
ETA70782.1
IMG reference gene:2510910376; PFAM: Outer membrane efflux protein; TIGRFAM: type I secretion outer membrane protein, TolC family.
  
 
 0.820
ETA70198.1
Hypothetical protein; IMG reference gene:2510909777.
 
     0.799
ETA69760.1
ABC-type antimicrobial peptide transport system, ATPase component; IMG reference gene:2510909331; PFAM: ABC transporter.
 
    
0.776
ETA70199.1
IMG reference gene:2510909778; PFAM: NAD dependent epimerase/dehydratase family.
       0.773
ETA70201.1
Sialic acid synthase; IMG reference gene:2510909780; PFAM: NeuB family.
       0.559
ETA70200.1
Asparagine synthase, glutamine-hydrolyzing; IMG reference gene:2510909779; PFAM: Glutamine amidotransferase domain; Asparagine synthase; TIGRFAM: asparagine synthase (glutamine-hydrolyzing).
       0.533
ETA70196.1
Glycosyl transferase; IMG reference gene:2510909775; PFAM: Glycosyl transferase family 2.
  
    0.478
Your Current Organism:
Pelagibacter ubique HIMB083
NCBI taxonomy Id: 1096769
Other names: C. Pelagibacter ubique HIMB083, Candidatus Pelagibacter ubique HIMB083, Candidatus Pelagibacter ubique str. HIMB083, Candidatus Pelagibacter ubique strain HIMB083
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.