STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ETA70921.1Hypothetical protein; IMG reference gene:2510910518; PFAM: Acetyltransferase (GNAT) domain. (223 aa)    
Predicted Functional Partners:
ETA70356.1
Malic enzyme; IMG reference gene:2510909944; PFAM: Phosphate acetyl/butaryl transferase; Malic enzyme, NAD binding domain; Malic enzyme, N-terminal domain.
    
 0.869
ETA70790.1
IMP dehydrogenase/GMP reductase; Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides.
   
  0.846
ETA69713.1
Mannose-1-phosphate guanylyltransferase; IMG reference gene:2510909281; PFAM: Nucleotidyl transferase; Mannose-6-phosphate isomerase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase.
    
 0.677
rnc
Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.
   
    0.672
ETA70201.1
Sialic acid synthase; IMG reference gene:2510909780; PFAM: NeuB family.
  
 
 0.668
ETA70295.1
Glutamate synthase family protein; IMG reference gene:2510909881; PFAM: Conserved region in glutamate synthase; GXGXG motif; Glutamate synthase central domain; Glutamine amidotransferases class-II.
   
 
 0.640
speE
S-adenosylmethionine decarboxylase proenzyme; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine.
    
 0.637
ETA70050.1
3-hydroxyacyl-CoA dehydrogenase; IMG reference gene:2510909624; PFAM: Enoyl-CoA hydratase/isomerase family; 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain.
    
 0.629
ETA69614.1
IMG reference gene:2510909178; PFAM: Delta-aminolevulinic acid dehydratase; Belongs to the ALAD family.
    
  0.593
gatB
glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, B subunit; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily.
    
  0.584
Your Current Organism:
Pelagibacter ubique HIMB083
NCBI taxonomy Id: 1096769
Other names: C. Pelagibacter ubique HIMB083, Candidatus Pelagibacter ubique HIMB083, Candidatus Pelagibacter ubique str. HIMB083, Candidatus Pelagibacter ubique strain HIMB083
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.