Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ALL81667.1 | ALL81668.1 | AD017_11490 | AD017_11495 | glutamyl-tRNA amidotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Metallophosphoesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.646 |
ALL81667.1 | rpmE2 | AD017_11490 | AD017_22975 | glutamyl-tRNA amidotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L31; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.464 |
ALL81667.1 | rpsO | AD017_11490 | AD017_05410 | glutamyl-tRNA amidotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 0.561 |
ALL81668.1 | ALL81667.1 | AD017_11495 | AD017_11490 | Metallophosphoesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. | glutamyl-tRNA amidotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.646 |
rpmE2 | ALL81667.1 | AD017_22975 | AD017_11490 | 50S ribosomal protein L31; Derived by automated computational analysis using gene prediction method: Protein Homology. | glutamyl-tRNA amidotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.464 |
rpmE2 | rpsO | AD017_22975 | AD017_05410 | 50S ribosomal protein L31; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 0.950 |
rpsO | ALL81667.1 | AD017_05410 | AD017_11490 | 30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | glutamyl-tRNA amidotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.561 |
rpsO | rpmE2 | AD017_05410 | AD017_22975 | 30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 50S ribosomal protein L31; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.950 |