STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TAPDE_000410Putative amidase C550.07. (547 aa)    
Predicted Functional Partners:
TAPDE_005663
GatB_N domain-containing protein.
 
 0.978
TAPDE_002923
Aspartyl-tRNA synthetase,mitochondrial.
  
 0.867
TAPDE_001692
Putative General amidase GmdA.
  
 
0.830
TAPDE_001839
Glutamyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.796
TAPDE_003591
Probable glutaminyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.796
TAPDE_005201
GST C-terminal domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.796
TAPDE_001823
AA_TRNA_LIGASE_II domain-containing protein.
   
 0.780
TAPDE_005293
AA_TRNA_LIGASE_II domain-containing protein.
   
 0.780
TAPDE_000685
Carbamoyl-phosphate synthase arginine-specific large chain.
   
 
 0.704
TAPDE_004814
Glutamine amidotransferase type-1 domain-containing protein.
   
 
 0.704
Your Current Organism:
Taphrina deformans
NCBI taxonomy Id: 1097556
Other names: T. deformans PYCC 5710, Taphrina deformans CBS 356.35, Taphrina deformans PYCC 5710
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