STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APT14448.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (134 aa)    
Predicted Functional Partners:
APT14447.1
tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL; Could methylate the ribose at the nucleotide 34 wobble position in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily.
       0.823
APT14446.1
AI-2E family transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.818
APT14450.1
Peptidase M16; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.789
APT14452.1
3-oxoacyl-ACP reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
    0.782
APT14110.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.774
APT14715.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.769
APT14422.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.764
APT14449.1
Cell division protein FtsK; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FtsK/SpoIIIE/SftA family.
       0.747
APT14451.1
Peptidase M16; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.747
APT14111.1
Serine/threonine protein phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.732
Your Current Organism:
Lactobacillus jensenii
NCBI taxonomy Id: 109790
Other names: ATCC 25258, CCUG 21961, CCUG 35572, CIP 69.17, DSM 20557, JCM 15953, L. jensenii, LMG 6414, LMG:6414, NRRL B-4550
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