STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A507DQ33DNA-directed DNA polymerase. (358 aa)    
Predicted Functional Partners:
A0A507EDZ1
Uncharacterized protein.
    
 0.754
A0A507E780
DNA-directed DNA polymerase.
    
 0.701
A0A507EDX0
Uncharacterized protein.
    
 0.683
A0A507E111
DNA polymerase.
   
 0.669
A0A507E2N6
Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family.
    
 0.654
A0A507DUD6
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.651
A0A507EE71
Small nuclear ribonucleoprotein Sm D2.
    
 0.645
A0A507DTS1
Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family.
    
 0.638
A0A507E8H3
Sm domain-containing protein.
    
  0.632
A0A507E091
Small nuclear ribonucleoprotein G.
    
  0.624
Your Current Organism:
Powellomyces hirtus
NCBI taxonomy Id: 109895
Other names: P. hirtus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.