Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
A0A507DW21 | A0A507DX36 | Protein kinase domain-containing protein. | Cysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy. | 0.975 |
A0A507DW21 | A0A507DY35 | Protein kinase domain-containing protein. | Lipase_3 domain-containing protein. | 0.968 |
A0A507DW21 | A0A507E3Z5 | Protein kinase domain-containing protein. | Autophagy-related protein 13; Belongs to the ATG13 family. Fungi subfamily. | 0.996 |
A0A507DW21 | A0A507E776 | Protein kinase domain-containing protein. | Uncharacterized protein. | 0.967 |
A0A507DW21 | A0A507EB00 | Protein kinase domain-containing protein. | Uncharacterized protein. | 0.996 |
A0A507DW21 | A0A507EDP1 | Protein kinase domain-containing protein. | Lipase_3 domain-containing protein. | 0.768 |
A0A507DW21 | A0A507EEU1 | Protein kinase domain-containing protein. | Autophagy-related protein 3. | 0.969 |
A0A507DW21 | A0A507EEV2 | Protein kinase domain-containing protein. | Ubiquitin-like modifier-activating enzyme ATG7; E1-like activating enzyme involved in the 2 ubiquitin-like systems required for cytoplasm to vacuole transport (Cvt) and autophagy. Activates ATG12 for its conjugation with ATG5 and ATG8 for its conjugation with phosphatidylethanolamine. Both systems are needed for the ATG8 association to Cvt vesicles and autophagosomes membranes. Autophagy is essential for maintenance of amino acid levels and protein synthesis under nitrogen starvation. Required for selective autophagic degradation of the nucleus (nucleophagy) as well as for mitophagy wh [...] | 0.669 |
A0A507DW21 | A0A507EFG5 | Protein kinase domain-containing protein. | Autophagy-related protein. | 0.995 |
A0A507DX36 | A0A507DW21 | Cysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy. | Protein kinase domain-containing protein. | 0.975 |
A0A507DX36 | A0A507DY35 | Cysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy. | Lipase_3 domain-containing protein. | 0.967 |
A0A507DX36 | A0A507E3Z5 | Cysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy. | Autophagy-related protein 13; Belongs to the ATG13 family. Fungi subfamily. | 0.641 |
A0A507DX36 | A0A507E776 | Cysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy. | Uncharacterized protein. | 0.740 |
A0A507DX36 | A0A507EAQ9 | Cysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy. | Protein kinase domain-containing protein. | 0.900 |
A0A507DX36 | A0A507EB00 | Cysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy. | Uncharacterized protein. | 0.608 |
A0A507DX36 | A0A507EDP1 | Cysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy. | Lipase_3 domain-containing protein. | 0.871 |
A0A507DX36 | A0A507EEU1 | Cysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy. | Autophagy-related protein 3. | 0.776 |
A0A507DX36 | A0A507EEV2 | Cysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy. | Ubiquitin-like modifier-activating enzyme ATG7; E1-like activating enzyme involved in the 2 ubiquitin-like systems required for cytoplasm to vacuole transport (Cvt) and autophagy. Activates ATG12 for its conjugation with ATG5 and ATG8 for its conjugation with phosphatidylethanolamine. Both systems are needed for the ATG8 association to Cvt vesicles and autophagosomes membranes. Autophagy is essential for maintenance of amino acid levels and protein synthesis under nitrogen starvation. Required for selective autophagic degradation of the nucleus (nucleophagy) as well as for mitophagy wh [...] | 0.688 |
A0A507DX36 | A0A507EFG5 | Cysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy. | Autophagy-related protein. | 0.997 |
A0A507DY35 | A0A507DW21 | Lipase_3 domain-containing protein. | Protein kinase domain-containing protein. | 0.968 |
page 1 of 6