STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A507E329Uncharacterized protein. (214 aa)    
Predicted Functional Partners:
A0A507DZI4
Uncharacterized protein.
    
 0.999
A0A507E0A2
WD_REPEATS_REGION domain-containing protein.
   
 0.999
A0A507EF14
Uncharacterized protein.
   
 0.999
A0A507EFE0
Uncharacterized protein.
   
 0.999
A0A507DXL6
Uncharacterized protein.
   
 0.948
A0A507E3P0
RRM domain-containing protein.
   
 0.837
A0A507E5R4
RRM domain-containing protein.
   
 0.837
A0A507E3E4
ABM domain-containing protein.
   
 0.823
A0A507EG00
RRM domain-containing protein.
   
 0.783
SUS1
Transcription and mRNA export factor SUS1; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. At the promoters, SAGA is required for recruitment of the basal transcription machinery. It influences RNA polymerase II transcriptional activity through different activities such as TBP interaction and promoter selectivity, interaction with transcription activators, and chromatin modification through histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex required for deubiquitination of [...]
   
 
 0.771
Your Current Organism:
Powellomyces hirtus
NCBI taxonomy Id: 109895
Other names: P. hirtus
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